Targeted sequencing of Aspalathus pycnantha - SRA

SRX22405210: Targeted sequencing of Aspalathus pycnantha
1 ILLUMINA (Illumina HiSeq 3000) run: 1.1M spots, 334.2M bases, 137.4Mb downloads

Design: Target capture using the "NitFix" panel of 100 loci

Submitted by: Mississippi State University

Study: Targeted sequencing in the Nitrogen-Fixing Clade Part 1

PRJNA1021556 • SRP470581 • All experiments • All runs

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Raw sequencing reads from herbarium specimens collected for the study "Shifts in evolutionary lability underlie independent gains and losses of root-nodule symbiosis in a single clade of plants." The method of data collection has been reported extensively in Folk et al. 2021: https://doi.org/10.1002/aps3.11410. Methods related to sequence assembly can be found in Kates et al. 2021 https://doi.org/10.3389/fpls.2021.669064.

Sample: Targeted sequencing of Aspalathus pycnantha

SAMN37561931 • SRS19441887 • All experiments • All runs

Organism: Aspalathus pycnantha

Library:

Name: 11d85c01-146b-435b-a9d3-43c588efb375

Instrument: Illumina HiSeq 3000

Strategy: Targeted-Capture

Source: GENOMIC

Selection: Hybrid Selection

Layout: PAIRED

Runs: 1 run, 1.1M spots, 334.2M bases, 137.4Mb

Run	# of Spots	# of Bases	Size	Published
SRR26705369	1,114,106	334.2M	137.4Mb	2023-11-07

ID:: 30387678

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